For Noname's and any one else's convenience, I am going to post a recap of what has happened since Shutzhund. If there are any mistakes, please let me know.
The team has traveled to Trinity Facility to rescue Cobalt Leader, Aisha, and Neville, who have been kidnapped for experimentation because they won Schutzhund.
The team has been joined by Starfall's characters, who include Neku (a lightsaber-wielding anthro-reptile), Hawkeye (a cyborg avian), Cale (an electrokinetic chameleon), Agito (a dichotomous wolf), and Slash (...something else, I can't remember).
Trinity Facility is composed of two parts; the above-ground building which is a faux factory designed to be a front; and the underground facilities where all the "real" work is done.
The good guy team has split into three parts:
1) About half of the good guys, led by James, have infiltrated the underground facilities attempting to find and rescue the prisoners. I believe Stern is part of this group.
2) Most of the other characters are in Aimee's team, which has also gone underground to find out what's going on down there.
3) Shelton, Aydin, and Bailey are posing as Dragonstorm inspectors in an attempt to get information directly from Trinity.
Shakila was separated from Team 1, and left in the power room, where she hacked into the system. Unfortunately, Trinity discovered this, and sent Project Zeta, a powerful experiment, to kill her.
Team 2 was attacked by Subject 19, who sent them packing.
Team 1 was attacked by guards, and to my knowledge is still fighting them.
Shakila managed to kill Project Zeta on her own using her laptop and the sprinkler system.
Cobalt Leader has been taken to Kain, as the first to be experimented on.
Bailey separated from Team 3 early on to inspect the maintenance tunnels. Shelton and Aydin reached Trinity's office and gained her trust.
Subject 19 had a falling out with Trinity, and has left the base with a mysterious red vial of liquid.
Trinity left to go kill Shakila, but Shelton followed her and tricked her into taking the wrong hallway. He and Shakila then got trapped in a technician's closet, where they admitted their love for each other (in your face, Stern! Who was first?

), until being rescued by Bailey.
Trinity has reached Aimee and is dueling her in hand-to-hand combat.
Aydin stayed in Trinity's office and sent all her files to a remote source for later viewing, and downloaded a backup copy onto a flash drive. He then found a message from a Subject 16, and traveled to rescue him. Subject 16 turned out to be a blind human male who warns that if Subject 19 uses the red vial on herself she will become extremely powerful. The two were then attacked by guards.
That's where we are right now. Hope this helps!

Again, please let me know if there are any mistakes.